The 28-year-old actor - who plays the titular Time Lord - is very excited about the celebration of the show which will take place in November 2013 and insists he will definitely be a part of it.
And he thinks the sci-fi format of the series would be perfect for 3-D technology which could be used for a one-off special.
He told BANG Showbiz: “I love making ‘Doctor Who’ and I get to be part of that 50th year which they’ll do something mental for. You know it will be brilliant.
"I’m interested in all the 3-D stuff. If it could be filmed for 3-D TV that would be fun, especially with ‘Doctor Who’, but it’s very expensive. I don’t know how they’d do it."